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Dr. Steve Roffler

IBMS

Academia Sinica

sroff@ibms.sinica.edu.tw

(Tel) 886-2-2652-3079

 

Ms. Mei Lee

Licensing Associate

Academia Sinica

PEG@gate.sinica.edu.tw

(Tel) 886-2-2787-2503

(Fax) 886-2-2651-8049

 

 

 

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Anti-PEG Antibody FAQ

 

Contents


Anti-PEG antibodies

  1. What are anti-PEG antibodies?
  2. What is the subclass of the antibodies?
  3. What animal are the antibodies from?
  4. Are preservatives present?
  5. Are carrier proteins present?
  6. What buffer are the antibodies shipped in?
  7. How should I store the antibodies?
  8. How long can the antibodies be stored?
  9. Are there any publications regarding these antibodies?
  10. Has anyone else used these antibodies?

Antibody specificity

  1. What do the antibodies bind to?
  2. Can the antibodies bind free PEG?
  3. Can the antibodies bind to branched-chain PEG? long PEG?
  4. Does the terminal group or linker affect binding?
  5. Can the antibodies assay PEGylated compounds in serum samples?
  6. Does Tween-20 interfere with the antibodies?

Anti-PEG ELISA

  1. Which antibodies should I use for ELISA?
  2. What kind of molecules can be assayed by anti-PEG ELISA?
  3. What is the detection limit of the assay?
  4. Do you have a standard protocol for an anti-PEG ELISA?
  5. Can I coat AGP3 and use AGP3 for detection also?
  6. Can I use lower concentrations of the antibodies for coating/detection?
  7. Can I premix biotin and streptavidin detection reagents?

Antibody quality control

  1. What quality control are performed for each lot?
  2. Are the antibodies purified?
  3. How big is each lot?
  4. Is there lot to lot variation?
  5. Can you supply enough antibody for our project?

Ordering

  1. How do I purchase the antibodies?
  2. Can I get a sample?
  3. Can I order less than 1 mg antibody?
  4. Can we test different lots to find the one that works best for us?
  5.  I am a researcher at a university or non-profit organization. How can I get some of your antibodies?
  6. Who do I contact with ordering questions?

Shipping

  1. How do you ship the antibodies?
  2. When will we get our order?
  3. Can we use our FedEx account?
  4. Who can I contact to open a World Courier account?
  5. Who can I contact to open a Midnite Express account?
  6. Is there sufficient dry ice in my shipment?

Problems and Their Solutions

  1. Where can I get my technical question answered?
  2. Who do I contact about ordering antibody?
  3. Where can I get help about shipping my order?
  4. My background is too high.
  5. The signal is too low.
  6. My assay is not working as expected. Who can help me?
  7. I can't afford the antibodies. Can you give me some for free?

 


The FAQ




Anti-PEG Antibodies


  1. Q: What are anti-PEG antibodies?

     

    A:  Our anti-PEG antibodies are monoclonal antibodies that bind to the repeating subunits present in the polyethylene glycol polymer. These antibodies can be employed to detect and assay PEGylated molecules, including PEGylated proteins, particles and liposomes.

     

     

  2. Q: What is the subclass of the antibodies?

     

    A:  AGP3 and AGP4 are IgM antibodies. Appropriate anti-IgM secondary antibodies should be used to detect AGP3 and AGP4.

     

     

  3. Q: What animal are the antibodies from?

     

    A:   The antibodies are derived from mice. You should use anti-mouse secondary antibodies for detection.

     

     

  4. Q: Are preservatives present?

     

    A:   We add 0.02% sodium azide to the antibodies. We can prepare antibodies without preservatives as a special order (no extra charge). All antibodies are also filter sterilized.

     

     

  5. Q: Are carrier proteins present?

     

    A:   No.

     

     

  6. Q: What buffer are the antibodies shipped in?

     

    A:   The antibodies are shipped in PBS (0.14 M  NaCl, 2.7 mM KCl, 1.5 mM KH2PO4, 8.1 mM Na2HPO4). We add 50% glycerol to biotinylated antibodies or to antibodies if they are not shipped on dry ice.

     

     

  7. Q: How should I store the antibodies?

     

    A:   We recommend that you aliquot the antibodies into working amounts and freeze them at -80oC (or -20oC) for long-term storage. The antibodies are also stable for at least one month at 40C, as long as they are not contaminated with microbes. You can also add 50% glycerol to the antibodies and keep them for at least 1 year at -20oC. Do not dilute the antibodies before storing them! Do not repeatedly freeze-thaw the antibodies.

     

     

  8. Q: How long can the antibodies by stored?

     

    A:   They should be stable for a minimum of 3 years when stored undiluted at -80oC.

     

     

  9. Q: Are there any publications regarding these antibodies?

     

    A:   Yes, several papers concerning these anti-PEG antibodies have been published. Pdf files of some papers are available.

     

     

  10. Q: Has anyone else used these antibodies?

     

    A:   More than 80 pharmaceutical and biotechnology companies have purchased our anti-PEG antibodies

     

     


Antibody specificity


  1. Q: What do the antibodies bind to?

     

    A The antibodies bind to the repeating subunits present in the polyethylene glycol polymer. The minimal binding domain appears to correspond to PEG1000 (PEG with a molecular weight of 1000 Da).

     

     

  2. Q: Can the antibodies bind free (unconjugated) PEG?

     

    A:   Yes and No.

     

    Yes: The antibodies can bind to PEG as long as it is "immobilized". So, for example, amino-terminal PEG can stick to ELISA plates. The antibodies bind very strongly to such PEG-coated microtiter plates. Likewise, the antibodies bind to PEG in immunohistochemical sections and to PEG on nitrocellolose paper. The antibodies bind best to PEG that is physically attached to proteins, liposomes, cells and nanoparticles.

     

    No: Free PEG chains in solution are bound with low affinity by the antibodies. Thus, detection of free PEG molecules by ELISA is not very sensitive. This means that unconjugated PEG will not interfere with assays.

     

     If you need to measure the concentration of unconjugated PEG, you can use our newly developed cell-based assay system.

     

     

  3. Q: Can the antibodies bind to branched chain PEG? Long PEG?

     

    A:   Yes, they can! In fact, since the antibodies bind to the PEG backbone, assay sensitivity increases as more PEG chains are present or as the length of the PEG chain increases.

     

     

  4. Q: Does the terminal group or linker affect binding?

     

    A:  No. Since our antibodies bind to the PEG backbone, the terminal group and linker chemistry don't influence binding. This is in contrast to "anti-PEG" antibodies that bind the terminal methoxy group present in some PEG molecules.

     

     

  5. Q: Can the antibodies assay PEGylated compounds in serum samples?

     

    A: Yes! Serum does not appear to adversely affect the binding of our anti-PEG antibodies to PEGylated compounds.

     

  6. Q: Does Tween-20 interfere with the antibodies?

     

    A: No. The epitope recognized by the anti-PEG antibodies is much larger than the PEG-link regions of Tween-20. This detergent can safely be used in ELISA assays. CHAPS can also be used instead of Tween-20.

     

     


Anti-PEG ELISA


  1. Q: Which antibodies should I use for ELISA?

     

    A:   To date, we suggest using AGP4 as a capture antibody at 0.25 ug/well (96-well microtiter plates). AGP3-biotin, 3.3-biotin or AGP4-biotin can be used as the detection antibodies. 3.3-biotin usually works best. Streptavidin-HRP (we use SA-HRP from Jackson Laboratories) can then be used to visualize binding. The detection antibodies have slightly different binding abilities depending on the nature of the PEGyated compound. We have published a paper (anti-PEG ELISA) comparing differnet antibodies for sandwich ELISA.

     

     

  2. Q: What kind of molecules can be assayed by anti-PEG ELISA?

     

    A:   The types of molecules that we or others have assayed include many different PEG-modified proteins, PEG-modified liposomes and PEG-modified nanodots.

     

     

  3. Q: What is the detection limit of the assay?

     

    A:   The detection limit depends strongly on what you are assaying, Typically, a sandwhich assay can detect ~ 1 pM PEGylated q-dots, 1 ng/ml lipodox and 1 ng/ml Pegasys.

     

     

  4. Q: Do you have a standard protocol for an anti-PEG ELISA?

     

    A:   Yes. We have specific assays depending on the antibody combinations you wish to use:

     

                 

    AGP3 as capture antibody  ----   AGP3-biotin or AGP4-biotin detection

     

     

    AGP3 as capture antibody  ------ 3.3-biotin detection

     

     

     

    AGP4 as capture antibody  ----   AGP3-biotin or AGP4-biotin detection

     

     

    AGP4 as capture antibody  ------ 3.3-biotin detection

     

     

     

  5. Q: Can I coat AGP3 and use AGP3 for detection also?

     

    A:   No. When you add secondary detection antibody (anti-IgM or anti-Ig conjugate), they will bind AGP3 coated on the plates, giving a high constant background.

     

    However, you can coat AGP3 or AGP4 and then use AGP3-biotin, AGP4-biotin or 3.3-biotin in combination with streptavidin-HRP for detection. This is the recommended assay format for all PEGylated compounds.

     

    You could also coat E11, then detect with AGP3 or AGP4 followed by IgM-specific-HRP conjugate. Likewise, you can coat AGP3 or AGP4 and then detect with E11 followed by IgG-specific-HRP conjugate. However, background binding is usually higher and assay sensitivity is typically not as good as compared to using biotin-labeled antibodies for detection.

     

     

  6. Q: Can I use lower concentrations of the antibodies for coating/detection?

     

    A:   Yes, but assay sensitivity will decrease when AGP3 is used as the capture antibody. However, the amount of AGP4 can be reduced to 0.25 mg/well with little impact on assay sensitivity.

     

     

  7. Q: Can I premix biotin and streptavidin detection reagents?

     

    A:   Yes!  Premixing AGP3-biotin or AGP4-biotin with streptavidin-HRP before adding them to the ELISA plate is highly recommended. Assay sensitivity is usually increased by premixing (see data below). Assay time is also reduced.

     

    Premixing is NOT recommended when using 3.3-biotin as the detection reagent.

     

     

    AGP3-biotin detection of PEGasys

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml       streptavidin-HRP versus traditional individual addition method

     

    AGP3-biotin detection of Lipo-dox

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml streptavidin-HRP versus traditional individual addition method

     

    AGP3-biotin detection of Q-dots

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml streptavidin-HRP versus traditional individual addition method

     

    AGP4-biotin detection of PEGasys

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml streptavidin-HRP versus traditional individual addition method

     

    AGP4-biotin detection of Lipo-dox

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml streptavidin-HRP versus traditional individual addition method

     

    AGP4-biotin detection of Q-dots

    AGP3 (1 mg/well) capture antibody

    Compare pre-mixed 5 mg/ml AGP3-biotin and 1 mg/ml streptavidin-HRP versus traditional individual addition method

     

     


Antibody quality control


  1. Q: What quality control are performed for each lot?

     

    A:  Antibody concentration in each lot is determined by BCA assay using bovine serum albumin as a standard. We then assay graded concentrations of antibody sampled from each lot for antigen binding activity on microtiter plates coated with BSA-PEG5000. The ELISA results must exceed the results obtained with standard antibody preparations.

     

     

  2. Q: Are the antibodies purified?

     

    A: Yes. IgM antibodies (AGP3 and AGP4) are purified by gel filtration. IgG antibodies (E11 and 3.3) are purified by protein A affinity chromatography and then transferred to PBS by dialysis. All antibodies are filter sterilized.

     

  3. Q:How big is each lot?

     

    A: Lots typically range from 12 to 24 mg.

     

     

  4. Q: Is there lot to lot variation?

     

    A: Yes. We test each lot to ensure the activity of the lot exceeds a standard preparation of each antibody. However, companies have reported lot-to-lot variations in their particular assays.

     

     

  5. Q: Can you supply enough antibody for our project?

     

    A: We can supply up to 100 mg without problem. Larger amounts require a schedule.


Ordering


  1. Q:How do I purchase the antibodies?

     

    A: Orders can be made by following the instructions on the orders page

     

     

  2. Q: Can I get a sample?

     

    A:   Yes! Just send an email with your request to:

     

    sroff@ibms.sinica.edu.tw

    I will send a sample by regular mail.

     

  3. Q: Can we test different lots to find the one that works best for us?

     

    A:  Yes! Many companies have found that particular lots work best in their in-house assays. We are happy to add some samples to your shipment.

     

     

  4. Q: I am a researcher at a university or non-profit organization. How can I get some of your antibodies?

     

    A: Just ask. I will send samples of any of our antibodies by regular post for your research providing that:

     

    1. You are not receiving funding from a for-profit company.

     

    2. Please acknowledge the antibodies in publications using the antibodies. Appropriate references are:

     

    TL Cheng, CM Cheng, BM Chen, DA Tsao, KH Chuang, SW Hsiao, YH Lin and SR Roffler. Monoclonal antibody-based quantitation of poly(ethylene glycol)-derivatized proteins, liposomes, and nanoparticles. Bioconj. Chem. 16:1225-31, 2005.

     

    or

     

    NM Tsai, TL Cheng and SR Roffler. Sensitive quantitation of poly(ethylene glycol)-modified proteins. Biotechniques 30: 396-402, 2001.

     

    or

     

    Su YC, Chen BM, Chuang KH, Cheng TL, Roffler SR. Sensitive Quantification of PEGylated Compounds by Second-Generation Anti-Poly(ethylene glycol) Monoclonal Antibodies. Bioconjug Chem., 21:1264-70, 2010.

     

     

  5. Q: Who do I contact with ordering questions?

     

    A: Information about orders should be addressed to:

     

    Bing-Mae Chen

    IBMS

    Academia Sinica

    Academia Road, Section 2, No. 128

    Taipei 11529, Taiwan

    (886)2-2789-9152

    bingmae@ibms.sinica.edu.tw

     

    or

     

    Mei Lee

    Office of Public Affairs

    Academia Sinica

    Academia Road, Section 2, No. 128

    Taipei 11529, Taiwan

     

    (886) 2-2787-2503

    PEG@gate.sinica.edu.tw

     

     


Shipping


  1. Q: How do you ship the antibodies?

     

    A: We prefer to ship the antibodies on dry ice to ensure their quality. Currently, we suggest you ship via World Courier or Hankyu Hanshin Express (Taiwan) Ltd. We can also send smaller orders in 50% glycerol by regular post or FedEx. We will pay for the shipping by regular post.

     

    FedEx does not ship dry ice packages out of Taiwan.

     

     

  2. Q: When will we get our order?

     

    A: Any purchase order received by Friday morning (Taiwan Time) will be shipped on the following Tuesday. Orders usually arrive in the US by Thursday or Friday (US time)

     

     

  3. Q: Can we use our FedEx account?

     

    A: FedEx doesn't accept dry-ice shipments out of Taiwan so we suggest alternative shipping companies for large orders.

     

     

  4. Q: Who can I contact to open a World Courier account?

     

    A: A contact for World Courier is here.

     

     

  5. Q: Who can I contact to open a Midnite Express account?

     

    A: A contact for Midnite Express is here.

     

     

  6. Q: Is there sufficient dry ice in my shipment?

     

    A: Yes. We pack with enough dry ice to last a week.

     

     

     


Problems and their solutions


  1. Q: Where can I get my technical question answered?

     

    A: You can try contacting Dr. Steve Roffler with your technical questions by sending an email to sroff@ibms.sinica.edu.tw or calling 886-2-2652-3079.

     

     

  2. Q: Where can I get help about ordering an antibody?

     

    A: Information about orders should be addressed to:

     

    Bing-Mae Chen

    IBMS

    Academia Sinica

    Academia Road, Section 2, No. 128

    Taipei 11529, Taiwan

    (886) 2-2789-9152

    bingmae@ibms.sinica.edu.tw

     

    or

     

    Mei Lee

    Office of Public Affairs

    Academia Sinica
    Academia Road, Section 2, No. 128

    Taipei 11529,Taiwan

     

    PEG@gate.sinica.edu.tw

     

    TEL: (886) 2-2787-2503

    FAX: (886) 2-2651-8049

     

    More help information about ordering is provided on the order page.

     

     

  3. Q: Where can I get help about shipping my order?

     

    A: Go here.

     

     

  4. Q: Where can I get help about shipping my order?

     

    A: You can email or call:

     

    Bing-Mae Chen

    IBMS

    Academia Sinica

    Academia Road, Section 2, No. 128

    Taipei 11529, Taiwan

    (886) 2-2789-9152

    bingmae@ibms.sinica.edu.tw

     

    More information about shipping is provided on the shipping page.

     

     

  5. Q: My background is too high.

     

    A: Here are some things you can try:

     

    Block with 5% skim milk at 37oC for an hour and then wash 3X with PBS. 

     

    Make sure the secondary antibody doesn't bind the capture antibody.

     

    Decrease the concentrations of the secondary detection reagents.

     

    Make sure you wash the plates with PBS/Tween and then PBS.

     

    Use biotin-labeled second antibodies (AGP3-biotin, AGP4-biotin or 3.3-biotin).

     

    Premix AGP3-biotin or AGP4-biotin with streptavidin-HRP before adding these to the ELISA plate.

     

    Reduce AGP4 coating concentration (use 5 µg/ml).

     

     

  6. Q: The signal is too low.

     

    A: Make sure your sample doesn't have free PEG molecules in it. Free PEG can compete for antibody binding sites and produce low assay sensitivity.

     

    Use 20 µg/ml AGP3 for coating (5 µg/ml is adequate for AGP4).

     

     

  7. Q: My assay is not working as expected. Who can help me?

     

    A: You can contact Dr. Steve Roffler with your assay questions by sending an email to sroff@ibms.sinica.edu.tw or calling 886-2-2652-3079.

     

     

  8. Q: I can't afford the antibodies. Can you give me some for free?

     

    A: Just ask by sending an email to Dr. Steve Roffler.

     

     sroff@ibms.sinica.edu.tw

     

    I will send samples of antibody in 50% glycerol by regular post for your research providing that:

     

    1. You are not receiving funding from a for-profit company.

     

    2. Please acknowledge the antibodies in relevant publications. Appropriate references are:

     

    TL Cheng, CM Cheng, BM Chen, DA Tsao, KH Chuang, SW Hsiao, YH Lin and SR Roffler. Monoclonal antibody-based quantitation of poly(ethylene glycol)-derivatized proteins, liposomes, and nanoparticles. Bioconj. Chem. 16:1225-31, 2005.

     

    or

     

    NM Tsai, TL Cheng and SR Roffler. Sensitive quantitation of poly(ethylene glycol)-modified proteins. Biotechniques 30: 396-402, 2001.

     

    or

     

    Su YC, Chen BM, Chuang KH, Cheng TL, Roffler SR. Sensitive Quantification of PEGylated Compounds by Second-Generation Anti-Poly(ethylene glycol) Monoclonal Antibodies. Bioconjug Chem., 21:1264-70, 2010.

     

Copyright © 2008 (Steve Roffler). Design by Andreas Viklund.