Dr. Lim, Carmay
Emeritus Research Fellow
- +886-2-2789-9043 (Lab) (Room No: N117)
- +886-2-2652-3031 (Office)
- +886-2-2788-7641 (Fax)
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Specialty:
- Computational Biophysics
- Computational Chemistry
- Bioinformatics
Education and Positions:
1984, Ph.D. in Chemical Physics, University of Minnesota, Minneapolis
1979, B.S. in Chemistry, Royal Holloway College, London University
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GeoPCA: a new tool for multivariate analysis of dihedral angles based on principal component geodesics.
Dr. Lim, Carmay
Nucl. Acids Res, Dec 01, 2011The GeoPCA package is the first tool developed for multivariate analysis of dihedral angles based on principal component geodesics. Principal component geodesic analysis provides a natural generalization of principal component analysis for data distributed in non-Euclidean space, as in the case of angular data. GeoPCA presents projection of angular data on a sphere composed of the first two principal component geodesics, allowing clustering based on dihedral angles as opposed to Cartesian coordinates.